Back

Molecular Biology of the Cell

● American Society for Cell Biology (ASCB)

Preprints posted in the last 90 days, ranked by how well they match Molecular Biology of the Cell's content profile, based on 311 papers previously published here. The average preprint has a 0.17% match score for this journal, so anything above that is already an above-average fit.

1
Organelle Volume Facilitates Spindle Positioning During C. elegans Female Meiosis

Lazureanu, D. G.; Krueger, E.; Qiu, W.; Kopley-Smith, A. A.; Smith, C. S.; Voloshchuk, N.; Cortes, D. B.; Park, M.; Uryu, K.; Silva, M.; Trautman, E.; Innerberger, M.; Preibisch, S.; Vaxenburg, R.; Stark, A. K.; Bleck, C. K. E.; Reilly, M.; Wang, M. C.; Shroff, H.; McNally, F. J.

2026-10-09 cell biology 10.64898/2026.10.07.757430 medRxiv
Top 0.1%
38.0%
Show abstract

Cortical positioning of oocyte meiotic spindles is required for reducing chromosome number by segregating chromosomes into polar bodies. In C. elegans, kinesin-1 transports membrane-bound organelles inward into a central ball that is hypothesized to push the meiotic spindle outward. Using focused ion beam scanning electron microscopy, we found that the percent volume occupied by membrane-bound organelles was 28% in a mature oocyte that has completed endocytosis of the yolk precursor, vitellogenin, compared to 17% in a less mature oocyte that has not yet endocytosed vitellogenin. We therefore hypothesized that blocking endocytosis of vitellogenin would reduce the size of the central ball of organelles packed inward by kinesin-1 and limit outward movement of the spindle. Depletion of vitellogenin or proteins required for endocytosis resulted in a smaller central volume of kinesin-coated organelles and defective spindle positioning. A computer simulation of a simple exclusion model faithfully recapitulated wildtype and mutant spindle position phenotypes. These results support a volume exclusion model for positioning acentriolar meiotic spindles.

2
The extraordinary robustness of mitotic spindle assembly to microtubule dynamics plasticity revealed by end-binding proteins and tubulin tagging

Robert, M. L. V.; Perrier, A.; Chenevert, J.; El-Mossadeq, L.; Maton, G.; McDougall, A.; Castro, A.; Lorca, T.; Canman, J. C.; Castagnetti, S.; Dumont, J.; Lacroix, B.

2026-07-30 cell biology 10.64898/2026.07.29.741283 medRxiv
Top 0.1%
38.0%
Show abstract

Microtubules are dynamic, conserved cytoskeletal filaments that are essential for all eukaryotic cells. Microtubule dynamic properties are primarily characterized by measuring how fast they grow and shrink (growth and shrinkage rates) and how often they switch between assembly and disassembly (catastrophe and rescue frequencies). These four parameters measured for individual filaments can inform on the behavior of the entire microtubule network at the cell level. By comparing microtubule dynamics in Caenorhabditis elegans one-cell embryos using different genetically-encoded fluorescent probes, we observed an unexpected high variability in these parameters. Microtubule dynamics parameters were consistently higher in C. elegans strains expressing a fluorescently labelled microtubule end-binding protein than in strains relying on tubulin labelling, with microtubule growth rates differing by nearly a factor of two between the two conditions. This discrepancy was not limited to C. elegans, as we observed a similar effect in embryos of the tunicate Phallusia mammillata. Despite this, spindle size and assembly timing were only mildly affected. However, embryos expressing labelled end-binding protein exhibited higher frequency of mitotic defects and perturbed embryonic development upon exposure to various stresses such as elevated temperature or a compromised spindle assembly checkpoint. Thus, our work reveals both the remarkable robustness of mitotic spindle assembly in response to extreme microtubule dynamics plasticity, and the requirement for strict control of microtubule dynamics across successive early embryonic divisions. Our findings should also serve as a cautionary note when using tagged end-binding proteins to measure microtubule dynamics.

3
Transfected plasmids have reduced expression in cells deficient in SEPTIN 9 or ESCRT proteins

Ngwoke, E.; Hollien, J.

2026-08-24 cell biology 10.64898/2026.08.21.746337 medRxiv
Top 0.1%
36.1%
Show abstract

Transfection of cells with DNA plasmids typically involves the uptake of lipoparticles by endocytosis, followed by the inefficient escape of these particles from endosomes into the cytoplasm. We found that the expression of transfected plasmids was reduced in cells depleted of either SEPTIN 9 or proteins in the endosomal sorting complexes required for transport (ESCRT) pathway. The reduction in plasmid expression could not be fully explained by effects on endocytosis. SEPTIN 9 depletion appeared to reduce the acidification of plasmid-containing compartments, suggesting that it primarily affects the pH-sensitive escape of plasmids from endosomes. Depletion of the ESCRT proteins VPS36 or ALIX resulted in especially dramatic reductions in transfected plasmid expression, which were accompanied by reduced colocalization between the transfected DNA and CHMP4, an ESCRT protein important for endosomal membrane remodeling during intraluminal vesicle formation. Finally, transfected plasmid DNA was strongly colocalized with LC3B, suggesting that the default pathway for transfected material is autophagy.

4
Melanophilin, a Myosin Va Adapter Protein, Biases Track Selection of Myosin Va-and Kinesin-1-Transported Liposomes at Actin-Microtubule Intersections In Vitro

Bensel, B. M.; Fagnant, P. M.; Macfarlane, J. E.; Previs, M. J.; Trybus, K. M.; Warshaw, D. M.

2026-09-02 biophysics 10.64898/2026.09.01.748553 medRxiv
Top 0.1%
31.1%
Show abstract

Secretory vesicle transport from the Golgi to the cell membrane involves kinesin and myosin Va motors on the vesicle surface cooperatively navigating their shared cargo through numerous actin-microtubule (MT) intersections. How the track on which the cargo exits the intersection is selected so that vesicles are delivered to their destination with spatial and temporal fidelity remains unclear. Here we hypothesized that melanophilin -- the adapter that links myosin Va to pigmented melanosomes and can bind to both actin and MTs -- acts as a phosphorylation-dependent switch to bias track preference at actin-MT intersections. To test this, we modeled melanosome transport in vitro using 350-nm liposomes with ~5 surface-bound molecules each of constitutively active myosin Va, kinesin-1, and full-length melanophilin with varying phosphorylation levels. Liposomes were then challenged with actin-MT intersections. Regardless of the track the liposomes entered the intersection on, liposomes with phosphorylated melanophilin were biased towards exiting the intersection on actin filaments while those with dephosphorylated melanophilin were biased to exit on MTs. Consistent with this, phosphorylated melanophilin showed a 2-fold preference to bind actin over MTs, and slowed liposome transport by myosin Va along actin filaments by ~40% by effectively acting as an anchor. Conversely, dephosphorylated melanophilin preferentially bound (2-fold) MTs over actin and, by acting as a tether, increased the kinesin-1 liposome transport distance on MTs. Therefore, melanophilin, based on its phosphorylation state, can bias track selection of cargo transported by kinesin-1 and myosin Va through the cell's complex cytoskeletal network with its numerous actin-MT intersections.

5
Differential requirement for the Ire1 luminal domain in Candida albicans drug susceptibility and pathogenicity

Stack-Couture, S.; Towriss, N.; Skulska, I.; Kalabina, A.; Genereaux, J.; Dumeaux, V.; Shapiro, R. S.; Lajoie, P.

2026-09-28 cell biology 10.64898/2026.09.24.753484 medRxiv
Top 0.1%
22.4%
Show abstract

The opportunistic human pathogen Candida albicans depends on the unfolded protein response (UPR) for cell wall integrity, antifungal tolerance, filamentous growth, and virulence. The UPR is driven by the conserved transmembrane sensor Ire1, which is activated either by misfolded proteins through its luminal domain or by lipid bilayer stress (LBS) through its transmembrane domain. In budding yeast, these two activation modes deploy divergent transcriptional programs. Whether the requirement for these two input domains is separable in C. albicans, where the cell membrane and cell wall are themselves the targets of major antifungal drug classes, remains unknown. Here, we engineered a C. albicans strain expressing Ire1 lacking an intact luminal domain (ire1{Delta}LD), which no longer detects proteotoxic stress. The ire1{Delta}LD strain grew in the presence of the azole antifungals fluconazole and miconazole but was highly sensitive to heat shock, cell wall stress, and the echinocandin caspofungin. It was also unable to sustain filamentous growth and showed reduced virulence in a Caenorhabditis elegans infection model. RNA sequencing revealed only modest changes to the steady-state transcriptome of ire1{Delta}LD cells. Together, these findings define a differential requirement for the input domains of C. albicans Ire1, uncoupling growth under azole-induced membrane stress from the cell wall, thermal, and virulence-associated outputs that depend on proteotoxic sensing, a distinction that could inform antifungal strategies targeting the UPR.

6
SERCA is a host target of the SARS-CoV-2 envelope protein linking calcium homeostasis to autophagy

Berta, B.; Toth, S.; Lorincz, P.; Darjania, Z.; Kato, N. A. T.; Benachour, A.; Benachour, N.; Hegedus, T.; Padanyi, R.

2026-08-19 cell biology 10.64898/2026.08.14.744854 medRxiv
Top 0.1%
22.1%
Show abstract

The SARS-CoV-2 envelope (E) protein is a virulence factor that remodels host endomembranes, but mechanisms remain incompletely understood. We recently demonstrated that E protein interacts with and inhibits the sarco/endoplasmic reticulum Ca2-ATPase (SERCA), disrupting ER calcium homeostasis. Here, we investigated how this perturbation affects autophagy-associated membrane organization. E protein expression induced lipidated LC3 accumulation and enlarged p62-positive structures, consistent with dysregulated autophagic turnover. Although E protein partially colocalized with LC3 and p62, enlarged p62-positive structures were also observed in cells retaining the reticular ER distribution of E protein, indicating that their formation does not require association with E protein or ER reorganization. E protein also increased the association of p62-positive structures with lysosomes without altering lysosome abundance. Pharmacological SERCA activation attenuated E protein-induced remodeling of autophagy-associated structures, demonstrating that SERCA inhibition contributes to these alterations. Together, our findings establish SERCA-dependent ER calcium homeostasis as a host pathway linking E protein expression to remodeling of autophagy-associated membrane compartments, providing a mechanistic framework for how the SARS-CoV-2 E protein promotes ER membrane remodeling associated with coronavirus replication.

7
Nuclear wrinkles result from geometric adaptations to cellular and nuclear morphological changes in epithelial cells

Le, K. M.; Kono, Y.; Shimi, T.; Kimura, H.

2026-08-27 cell biology 10.64898/2026.08.26.747252 medRxiv
Top 0.1%
22.0%
Show abstract

Mechanical cues influence cell behavior and fate and are frequently accompanied by changes in nuclear shape; however, how epithelial nuclei accommodate such deformations remains incompletely understood. Here, we investigated the formation and regulation of nuclear wrinkles (NWs), inward folds of the nuclear envelope, in human epithelial cells. Using quantitative confocal imaging in 2.5D spheroid cultures and controlled 2D monolayers, we found that NWs formed frequently in MCF10A cells but rarely in hTERT-RPE1 cells, indicating pronounced cell-type specificity. NW frequency increased with cell density and was tightly associated with coordinated geometric changes consistent with nuclear rounding. Disruption of F-actin organization, but not microtubules, robustly induced NW formation, and acute cell rounding triggered by trypsinization was sufficient to induce widespread wrinkling across multiple cell types. Live-cell imaging revealed that NWs are dynamic and reversible at low cell density but become stabilized under sustained confinement. NW formation occurred without detectable nuclear envelope rupture, DNA damage, or stress-associated histone phosphorylation. Quantitative analysis supports a passive geometric model in which redistribution of excess nuclear surface area accommodates nuclear shape remodeling, allowing epithelial nuclei to buffer mechanical constraints while preserving nuclear integrity.

8
Klp61f and ncd function as an accelerator and brake to regulate myonuclear spacing

Folker, E.; Padilla, J. R.; Qiu, Y.; Kimmel, G.; Vallely, M.; Olivieri, L.

2026-07-27 cell biology 10.64898/2026.07.24.740572 medRxiv
Top 0.1%
18.7%
Show abstract

One of the first genes identified to regulate the spacing of nuclei in the multinucleated myofiber was Kinesin-1. However, the mechanism by which Kinesin-1 or other kinesins regulate myonuclear spacing is not known. Critically, the myofiber lacks centrosomes, and the many myonuclei act as the primary microtubule organizing centers of the cell. Because of this unique re-structuring, we hypothesized that the kinesins that drive centrosomes apart during mitotic spindle elongation may play a similar role in spacing myonuclei. We found that the bipolar Kinesin-5 (Klp61f) and the (-)-end directed Kinesin-14 (ncd) were both necessary for myonuclear spacing at different times, with both being necessary during embryogenesis, but only ncd being necessary in the fully differentiated myofiber. To investigate the shared mechanisms during embryogenesis, we used live-imaging and found that, similar to the mitotic spindle, Klp61f acts as an accelerator for myonuclear movement, whereas ncd acts as a brake contrary to this movement. To investigate these mechanisms and test the hypothesis that this is dependent on microtubule-sliding, we used super-resolution microscopy to visualize and quantify the microtubule network in animals with disrupted Klp61f or ncd. We found that in both cases, there was a decrease in the amount of microtubule overlap between neighboring myonuclei. Furthermore, we found that disrupting ncd led to severe changes in microtubule network organization, supporting our hypotheses that microtubule-sliding is necessary to space myonuclei, and that ncd likely functions through a unique mechanism in the differentiated myofiber to maintain myonuclear spacing. Together, our data supports a model where myonuclear spacing is regulated by a counteracting force generated by different kinesins during embryonic development. Furthermore, one kinesin, ncd, is repurposed in the differentiated myofiber to dynamically crosslink microtubules, a function necessary to anchor nuclei in place. Thus, kinesin motors regulate myonuclear spacing across developmental time by leveraging opposing forces through diverse mechanisms.

9
Lamin B1 affects nuclear shape and integrity through chromatin stiffness and not lamin stiffness

Li, A.; Chu, C. G.; Lang, N.; Banigan, E. J.; Stephens, A. D.

2026-08-11 cell biology 10.64898/2026.08.10.744010 medRxiv
Top 0.1%
18.5%
Show abstract

The mechanical properties of the nucleus are critical for maintaining nuclear integrity and function. We previously showed that chromatin dominates short-extension mechanics whereas lamins provide long-extension strain stiffening. To distinguish the roles of lamin isoforms, micromanipulation nucleus force measurements were performed on isolated nuclei from lamin A/C (Lmna-/-) and lamin B1 (Lmnb1-/-) knockout mouse embryonic fibroblast cells. Lamin A/C knockout does not alter short-extension nuclear stiffness but is essential for strain stiffening at longer extensions. Oppositely, lamin B1 loss reduced short-extension stiffness due to facultative heterochromatin loss while long-extension strain stiffening was slightly increased. Loss of lamin A/C and B1 resulted in similar lamin-chromatin linkers effects as LBR did not change and LAP2{beta} decreased in both. A simulation model of a polymeric lamin shell with stiff lamin A/C and softer lamin B1 subunits can qualitatively recapitulate experimental measurements of lamin knockout cells. Lamin A/C knockout resulted in abnormal nuclear shape but not nuclear blebbing or rupture whereas lamin B1 knockout, similar to other perturbations that cause heterochromatin loss, resulted in increased nuclear blebbing and rupture. This work illuminates the distinct mechanical roles of lamin A/C and B1 in determining nuclear structure and integrity.

10
KIFC1 overexpression induces monopolar spindles by preventing centrosome separation during rapid cleavage divisions

Yamamoto, T.; Kiyomitsu, A.; Ming, Y.; Kiyomitsu, T.

2026-08-20 cell biology 10.64898/2026.08.14.744973 medRxiv
Top 0.1%
18.4%
Show abstract

Bipolar spindle assembly is essential for accurate chromosome segregation. KIFC1, a conserved Ran- regulated minus-end-directed kinesin-14 motor, accumulates in the nucleus during interphase and promotes chromatin-mediated spindle assembly during mitosis and meiosis. In human oocytes, reduced KIFC1 levels destabilize meiotic spindles, a defect that can be rescued by increasing KIFC1 expression. However, how KIFC1 expression levels affect mitotic spindle stability during cleavage divisions in vertebrates remains unclear. Here, we show that whereas an approximately 50% reduction in KIFC1 causes no detectable defects in spindle assembly, approximately 10-fold overexpression of KIFC1 induces monopolar spindle formation, leading to chromosome mis-segregation and embryonic lethality in medaka early embryos. KIFC1 overexpression results in ectopic centrosomal localization during interphase, impairing the separation of duplicated centrosomes before mitotic entry. Analyses of KIFC1 mutants demonstrated that these centrosome separation defects require KIFC1s microtubule-binding and motor activities and are further enhanced by deletion of KIFC1s nuclear localization sequences. Together, our findings demonstrate that tight regulation of KIFC1 expression and its nuclear sequestration is essential for the proper separation and positioning of duplicated centrosomes before mitotic entry, thereby ensuring efficient bipolar spindle assembly during the rapid cleavage divisions of vertebrate embryos. HighlightsO_LIKIFC1 accumulates in the nucleus and at the embryonic spindle midplane via the Ran pathway. C_LIO_LIPartial KIFC1 depletion does not impair spindle assembly in medaka early embryos. C_LIO_LIKIFC1 overexpression induces monopolar spindles by preventing centrosome separation. C_LIO_LICentrosome separation defects require KIFC1 microtubule-binding and motor activity. C_LI

11
An in vivo examination of Dynein-Cargo complex formation.

Allen, P.; Neiswender, H.; Lu, W.; Lakonishok, M.; Veeranan-Karmegam, R.; Pride, J.; Gelfand, V. I.; Gonsalvez, G. B.

2026-08-04 cell biology 10.64898/2026.08.02.742322 medRxiv
Top 0.1%
18.3%
Show abstract

Long-range intracellular transport relies on microtubule motors. This process is particularly important in large cells such as neurons and oocytes. While transport towards the plus-end of microtubules utilizes many kinesins, minus-end transport is largely mediated by a single motor, cytoplasmic dynein. Activation of dynein requires the large dynactin complex as well as a cargo adaptor. How dynein, dynactin, and adaptors assemble in vivo, particularly within specialized tissues such as the Drosophila egg chamber remains unclear. In the current study, we defined the dynein interactome in Drosophila egg chambers using in vivo proximity biotin ligation. Our findings suggest that Bicaudal-D (BicD) is the principal adaptor responsible for activating dynein and linking it with cargo in this tissue. We also identified Centrocortin (Cen) as a dynein adaptor in egg chambers. However, unlike BicD, loss of Cen did not affect dynein localization or apparent activation. To more specifically analyze adaptor-dependent assembly and cargo transport, we examined dynein light intermediate chain (Dlic) mutants known to impair adaptor binding. As expected, these mutants disrupted the BicD-dynein interaction. However, Cen remained associated with the dynein/dynactin complex in the mutant background, suggesting that Cen engages the motor by a different mechanism. Finally, live imaging of microtubules revealed that even when adaptor binding is compromised, dynein-driven microtubule gliding can still deliver nurse cell-derived cargo into the oocyte, albeit with reduced efficiency. Collectively, our results reveal multiple, mechanistically distinct routes for adaptor association with dynein in vivo and indicate that redundant processes can sustain cargo transport during oogenesis.

12
The single-PDZ domain protein TXBP-3 regulates contractility in the C. elegans spermatheca

Khalid, M.; Cram, E. J.

2026-10-06 cell biology 10.64898/2026.10.05.756805 medRxiv
Top 0.1%
18.3%
Show abstract

In the C. elegans reproductive system, oocyte transit through the spermatheca relies on parallel calcium and Rho-dependent signaling pathways to regulate actomyosin contractility. Here, we identify the conserved single-PDZ domain protein TXBP-3/TAX1BP3 as a dosage-dependent regulator of spermathecal contractility. TXBP-3 is expressed in contractile tissues, including the spermatheca and spermathecal-uterine (sp-ut) valve. Animals lacking txbp-3 do not display overt phenotypes or defects in ovulation. However, in nematodes expressing the genetically encoded calcium sensor GCaMP, deletion of txbp-3 results in more rapid transit of embryos through the spermatheca. Conversely, tissue-specific overexpression of TXBP-3 results in slower transit times due to hypercontraction of the spermathecal neck and sp-ut valve, causing oocyte severing and failures of embryos to exit the spermatheca. We find TXBP-3 promotes the active phosphorylated state of the calcium/calmodulin-dependent protein kinase II (CaMKII) UNC-43. When TXBP-3 is overexpressed or unc-43 is depleted, ovulations in which the embryo fails to exit show disrupted calcium signaling. Additionally, TXBP-3 functions independently of the RhoGEF RHGF-1 and in parallel with the RhoGAP SPV-1 to maintain the alignment of actin fiber bundles and protect embryo structural integrity. Together, our results establish TXBP-3 as a regulator of contractility, kinase activation, and cytoskeletal architecture in contractile tissues.

13
Cytokinesis genes regulate ring canal patterning and follicle cell differentiation in Drosophila

Mendoza, C. P.; Gomez, A.; Baumgartner, M.; Nystul, T. G.

2026-09-16 cell biology 10.64898/2026.09.10.750734 medRxiv
Top 0.1%
18.2%
Show abstract

Stable intercellular bridges that form through incomplete cytokinesis are present in a wide variety of cell types but their function in somatic cell differentiation is not well understood. Using super-resolution confocal microscopy, we identified a stepwise process of ring canal development in the follicle cells of the Drosophila ovary. Using a custom-trained deep learning model to aid in 3D image segmentation and follicle cell quantification, we found that ring canals are more heterogeneous at the early prefollicle stages compared to the more differentiated later stages. In addition, we found that depletion of the septin, peanut, caused cytokinetic defects but did not disrupt ring canal formation, whereas depletion of the ESCRT III gene, shrub, increased ring canal number in prefollicle cells and caused proliferation and differentiation phenotypes. Our findings identify cytokinesis and ring canal formation as a point of regulation in the patterning of proliferation and differentiation in the Drosophila follicle stem cell lineage.

14
Nuclear envelope buffering of cytoskeletal force stabilizes chromosome interactions in C. elegans meiosis

Nenstiel, R.; Liu, C.

2026-09-10 cell biology 10.64898/2026.09.07.749962 medRxiv
Top 0.2%
18.0%
Show abstract

Meiosis requires coordination between chromosome and nuclear envelope (NE) dynamics. Cytoskeletal forces transmitted through the NE via linker of nucleoskeleton and cytoskeleton (LINC) complexes drive chromosome movement but can also compromise nuclear integrity if not properly balanced. Here, we identify the conserved inner nuclear membrane protein NEMP-1 as a key regulator that contributes to buffering of excessive force at the meiotic NE in Caenorhabditis elegans. NEMP-1 localizes to the NE throughout meiotic prophase and becomes enriched at the NE in nuclei with a weakened nuclear lamina. Simultaneous depletion of NEMP-1 and the lamin protein LMN-1 results in premature nuclear collapse and defects in chromosome synapsis and homolog pairing. These phenotypes depend on excessive dynein-mediated forces acting on a compromised NE. Furthermore, analysis of homolog pairing in the absence of synapsis revealed that NEMP-1 and LMN-1 contribute to the stabilization of synapsis-independent homolog interactions at the NE. Together, our findings reveal that excessive force at the NE can destabilize homolog interactions, and support a model in which NEMP-1 and LMN-1 cooperatively buffer cytoskeletal forces to maintain nuclear integrity while stabilizing chromosome interactions during meiosis.

15
Adaptor interactions trigger Pan1 self-assembly during clathrin-mediated endocytosis in budding yeast

Mamta, M.; Rivier-Cordey, A.-S.; Ivanovic, L.; Bagyashree, V. T.; Kukulski, W.; Kaksonen, M.

2026-09-08 cell biology 10.64898/2026.09.04.749396 medRxiv
Top 0.2%
17.3%
Show abstract

Clathrin-mediated endocytosis requires the coordinated assembly of a highly dynamic protein network that couples membrane remodeling to actin-driven force generation. The essential budding yeast protein, Pan1, scaffolds the endocytic protein network by linking adaptor proteins, and other coat components, and actin assembly regulators. How Pan1 coordinates all these different proteins in space and time is not well understood. We show that Pan1 undergoes biomolecular condensation. Elevated Pan1 expression induced the formation of condensates that exhibited partial rapid molecular exchange, temperature-dependent reversibility, and sensitivity to disruption of weak hydrophobic interactions. The Pan1 assemblies are compositionally selective, preferentially enriching late-stage endocytic factors while excluding early adaptor proteins. Truncation analysis demonstrated that condensation depends on cooperative contributions from intrinsically disordered regions, the EH2 domain, and the oligomerization module, whereas a C-terminal region negatively regulates condensation. Deletion of Pan1 regions promoting its self-assembly perturbed Pan1 assembly and function at endocytic sites. Disruption of interactions between Pan1 and endocytic adaptors did not alter the dynamics of endocytic events but instead reduced the number of endocytic events marked by Pan1 and caused the formation of ectopic Pan1 condensates. This indicates that adaptor-mediated interactions spatially constrain Pan1 localization by seeding Pan1 assembly at endocytic sites. Our findings support a model in which adaptor proteins seed Pan1 assembly at the endocytic sites while multivalent interactions drive Pan1 self-assembly to build the higher-order molecular network of the late endocytic coat.

16
Extracellular Matrix Stiffness Controls Actin Cytoskeletal Tension

Perego, L.; Sergides, M.; Arbore, C.; Bianchi, G.; Gardini, L.; Capitanio, M.

2026-08-06 biophysics 10.64898/2026.08.02.742292 medRxiv
Top 0.2%
15.1%
Show abstract

Mechanical properties of the extracellular matrix (ECM) regulate cell behavior and strongly impact the cytoskeleton, yet direct measurements of actin tension across different ECM stiffnesses are lacking. Using a genetically encoded FRET-based actin tension sensor, we show that cells cultured on stiffer substrates exhibit increased spreading, reduced multicellular aggregation, and higher molecular tension within filamentous actin. Complementary measurements using an -actinin tension sensor support increased cytoskeletal mechanical loading. These results provide direct evidence that ECM stiffness modulates intracellular actin tension during mechanotransduction.

17
Uncoupling microtubule lifetime, stability and post-translational modifications.

Chocat, T.; Vianay, B.; Silberzan, F.; Gaillard, J.; Bonnemay, L.; Schaeffer, A.; Blanchoin, L.; THERY, M.

2026-09-15 cell biology 10.64898/2026.09.10.750621 medRxiv
Top 0.2%
15.0%
Show abstract

Microtubules (MTs) undergo continuous cycles of growth and disassembly. Because the transitions between these states are stochastic, MT age varies widely within a population. As MTs age, they are thought to accumulate post-translational modifications (PTMs) that, directly or indirectly, enhance their stability and thereby extend their lifetime. The rare MTs that withstand prolonged exposure to destabilizing drugs such as nocodazole (NZ) are indeed enriched in PTMs; yet the relationships between MT age, PTMs and stability remain unclear. Using microinjection of labelled tubulin, we measured microtubule network turnover in immortalized mouse embryonic fibroblasts. Half of the network was renewed within 3 minutes and 80% within 10 minutes, while approximately 5% of microtubules persisted for more than 20 minutes. These dynamics were comparable in quiescent and senescent cells, although the fraction of slowly renewing or non-renewing microtubules rose to 20% in senescent cells. Unexpectedly, neither the amount of PTMs (acetylation and detyrosination) nor resistance to NZ increased with MT age, and resistance to NZ was independent of these PTMs. Degrees of acetylation and detyrosination should therefore not be taken as readouts of MT age or stability. Because these PTMs do not accumulate on MTs over time, the chemical modification of polymerized tubulin is likely more reversible and dynamic than previously assumed.

18
Cellular integration of surface and nutrient signals during the early stage of filamentous growth in Saccharomyces cerevisiae

Pandey, S.; Louvet, M.; Kim, H.; Studer, D.; Borgeat, V.; Vincenzetti, V.; Dusserre, Y.; Delarue, M.; Pelet, S.

2026-09-03 cell biology 10.64898/2026.09.02.748872 medRxiv
Top 0.2%
14.9%
Show abstract

Budding yeast cells can transition from vegetative to filamentous growth under specific environmental stimuli. Saccharomyces cerevisiae has served as a model to understand this process, which is linked to the virulence of many fungal pathogens. One manifestation of filamentation in S. cerevisiae is the formation of pseudohyphal cells, which are elongated and divide in a polarized manner. Here, we established a live-cell imaging assay to monitor this morphogenetic transition and developed a set of fluorescent expression reporters to probe the activity of various signaling pathways during the first 10 hours of this transition. This approach allowed us to identify the stimulus that activates the filamentous growth Mitogen-Activated Protein Kinase (fgMAPK) pathway, which has long evaded identification. Our results indicate that the fgMAPK cascade senses mechanical cues and becomes activated when cells grow on a solid surface. In addition, we have observed that the stimulation of the transcription factor Gln3 regulated by the TOR pathway in low ammonium condition correlates with the elongation of the cells.

19
Dissection of centrosomal γ-TuRC activation pathways controlling microtubule density in interphase cells

Song, Y.; Rai, D.; Sluimer, L. M.; Spoelstra, M. F. M.; Kleijnen, Q. J.; Korte, B. J.; Koot, S. T.; Stecker, K. E.; Chen, F.; Akhmanova, A.

2026-08-19 cell biology 10.64898/2026.08.17.745143 medRxiv
Top 0.2%
14.9%
Show abstract

Animal microtubule-organizing centers, including the centrosome and the Golgi apparatus, regulate microtubule nucleation and anchoring through the {gamma}-tubulin ring complex ({gamma}-TuRC) and CAMSAP-mediated minus-end stabilization. However, functional redundancy between these pathways has impeded dissection of their contributions to controlling microtubule organization and density. Here, we addressed this problem using combinatorial gene knockouts, protein depletions and Expansion Microscopy. By simultaneously eliminating CAMSAP2 and the {gamma}-TuRC-targeting proteins AKAP450, pericentrin, CDK5RAP2, myomegalin, ninein and AKNA, we generated viable RPE1 cells that lack both Golgi-derived microtubules and {gamma}-TuRC localization within the pericentriolar material and at subdistal appendages. Despite the disruption of these major microtubule-organizing pathways, overall microtubule density was only partially reduced. The remaining microtubules depended on CEP192 and NEDD1, which, together with ch-TOG, can activate {gamma}-TuRC at the centriole wall, in acentriolar cells, and in biochemical reconstitution assays. Our results demonstrate that in the absence of CAMSAP-mediated stabilization, interphase microtubule formation strongly relies on {gamma}-TuRC activation, which occurs through several redundant pathways.

20
High-resolution CRISPR/Cas9 screens identify PAK2 as a suppressor of macrophage proliferation

Wanniarachchi, K. N.; Neupane, A.; Poudel, S.; Kasu, B.; Pradhan, B.; Balster, J. J.; Kerkvliet, J. G.; Hoppe, A. D.; Thiex, N. W.

2026-09-17 cell biology 10.64898/2026.09.14.751564 medRxiv
Top 0.2%
14.9%
Show abstract

Macrophage abundance is regulated by pathways controlling survival and proliferation, yet the genetic determinants of macrophage fitness remain poorly understood. Here, we performed replicate genome-wide CRISPR/Cas9 screens in primary murine bone marrow-derived macrophages (BMDMs) to identify positive and negative regulators of macrophage fitness. Validity of the screens is supported by finding previously characterized core essential genes such as those encoding translation machinery, while disruption of established tumor suppressors increased BMDM representation in the culture. As expected, Csf1r encoding the macrophage growth factor emerged as a positive regulator of macrophage fitness. Unexpectedly, Pak2, encoding p21-activated kinase 2 (PAK2), emerged as a negative regulator of macrophage fitness. Targeted Pak2 disruption increased BMDM accumulation and was associated with elevated cyclin-D1 expression, identifying PAK2 as a suppressor of macrophage proliferation. PAK2 also localized to CSF1-induced actin-rich membrane ruffles, yet its depletion did not impair ruffle formation. Instead, PAK2-depleted macrophages exhibited persistent F-actin-rich ruffles, larger macropinosomes, and increased fluid-phase uptake. These changes were accompanied by altered LIMK/cofilin signaling and persistent cofilin localization at macropinocytic structures. Phosphoproteomic analysis further identified reduced phosphorylation of proteins associated with cytoskeletal regulation, phosphoinositide signaling, and endosomal trafficking. Together, these findings identify PAK2 as a context-dependent regulator that restrains macrophage proliferation and membrane-remodeling activity and demonstrate that PAK2 has markedly different fitness functions in primary macrophages than previously identified in several transformed cell types.