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Molecular Biology of the Cell

American Society for Cell Biology (ASCB)

Preprints posted in the last 90 days, ranked by how well they match Molecular Biology of the Cell's content profile, based on 311 papers previously published here. The average preprint has a 0.17% match score for this journal, so anything above that is already an above-average fit.

1
A Sac7-Rho1 axis at the plasma membrane controls clathrin-independent endocytosis

Abbott-Wilson, L.; Rioux, D. J.; Patel, P. R.; Prosser, D. C.

2026-07-09 cell biology 10.64898/2026.07.08.737308 medRxiv
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In eukaryotes, our understanding of clathrin-independent endocytosis (CIE) lags far behind that of clathrin-mediated endocytosis (CME). CIE plays key roles in internalizing receptors, viruses, bacterial toxins, and pathogens; thus, deeper mechanistic insights are critical for understanding cellular strategies for plasma membrane regulation. Yeast CIE requires a signal relay between the stress sensor Mid2, the guanine nucleotide exchange factor (GEF) Rom1, the Rho1 GTPase, and the formin Bni1. While GEFs promote GTPase activity, GTPase-activating proteins (GAPs) conversely stimulate nucleotide hydrolysis and GTPase inactivation. Here, we provide new insight into CIE, adding the RhoGAP Sac7 as a regulator. SAC7 deletion in CME-deficient cells improved cargo internalization, and Sac7 localizes primarily to the mother cortex. Cells lacking SAC7 accumulate active Rho1 and retain Bni1 at the plasma membrane, where Bni1 retention may subsequently enhance actin assembly needed for CIE. Our results thus demonstrate that Sac7 negatively regulates CIE by restricting cortical Rho1 activity.

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Glk1p is an actin fold metabolic enzyme whose polymerization is sensitive to nucleotide state

Carver, M. D.; Kyriakakis, P.; Monfort, E.; Barry, R. M.; Leschziner, A. E.; Herzik, M. A.; Wilhelm, J.

2026-07-10 cell biology 10.64898/2026.07.09.731748 medRxiv
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The actin fold is present in enzymes ranging from sugar kinases to chaperones. Previous work on the actin fold metabolic enzyme, glucokinase (Glk1p) in S. cerevisiae found it could form filaments in response to its substrates, ATP and glucose (Stoddard et al., 2020). Here, we have identified the product, glucose 6-phosphate (G6P), as a second trigger for Glk1p polymerization in vitro. Furthermore, the addition of ADP to G6P-Glk1p filaments causes filament disassembly, suggesting that polymerization is sensitive to the state of the bound nucleotide and/or the transfer of the gamma phosphate. We have also identified a specific metabolic state, the accumulation of G6P during stationary phase, that triggers Glk1p polymerization in vivo. While the structures of Glk1p filaments in either the ATP/glucose or G6P-bound form are not similar to conventional actin filaments, the sensitivity of assembly to the gamma phosphate of the nucleotide provides a conceptual bridge between the cytoskeleton and metabolic regulation via enzyme polymerization.

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SGEF coordinates epithelial morphogenesis by regulating junction stability, collective migration, and extracellular matrix remodeling

Lovejoy, M.; Rabino, A. F.; Gonzalez-Blotta, L.; Gangasani, V.; Durham, S. M.; Kreider, G.; Garcia-Mata, R.

2026-07-20 cell biology 10.64898/2026.07.17.739205 medRxiv
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Polarized epithelia are essential for organ function, and disruption of epithelial polarity is a hallmark of many diseases, including cancer. We previously showed that the RhoG-specific guanine nucleotide exchange factor SGEF interacts with the Scribble polarity complex to regulate epithelial junction assembly in 2D monolayers. However, its role in epithelial morphogenesis and lumen formation in 3D remains unknown. Here, we combined quantitative morphometric analysis with long-term live-cell imaging to investigate the role of SGEF during MDCK cyst development. SGEF KD disrupted normal lumenogenesis, producing enlarged cysts with multiple collapsed lumens accompanied by reduced E-cadherin, {beta}-catenin, and ZO-1 expression. Loss of SGEF also altered the distribution of the actomyosin network. Re-expression of WT SGEF restored the normal phenotype, whereas restoration of E-cadherin and ZO-1 partially rescued lumen architecture, identifying the loss of junction integrity as a key driver of the morphogenetic defects. Unexpectedly, live-cell imaging revealed increased motility and frequent cyst fusion in SGEF-KD cysts. Restoring E-cadherin levels abolished cyst migration, while inhibition of matrix metalloproteinases markedly restored normal cyst volume and lumen architecture, identifying extracellular matrix remodeling as an additional contributor to the SGEF-deficient phenotype. Together, these findings identify SGEF as a key regulator of epithelial morphogenesis, coordinating junction integrity, actomyosin organization, lumen formation, and collective migration.

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Msc1 accumulates at and excludes nuclear pore complexes from nucleus-vacuole junctions.

Medina-Suarez, S.; Estevez-Silva, H. M.; Rodriguez-Herrera, N.; Machin, F.

2026-06-08 cell biology 10.64898/2026.06.03.729915 medRxiv
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Msc1 is a yeast nuclear envelope (NE) protein that facilitates DNA double-strand break repair. In its absence, cells exhibit abnormal nuclear morphologies and maldistribution of nuclear pore complexes (NPCs). Msc1 is not uniformly distributed across the NE but concentrates onto dynamic patches that often coincide with blebs or herniations. Here, we report that Msc1 abundance and the number of patches dramatically increase after the diauxic shift. Msc1 patches are devoid of NPCs and fully colocalize with nucleus-vacuole junctions (NVJs), which are involved in piecemeal micronucleophagy. In the absence of Msc1, abnormal NPC aggregates accumulate adjacent to vacuoles, both at and outside the NE. We conclude that Msc1 is the key factor that maintains NPC homeostasis as cells prepare to enter quiescence.

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The extraordinary robustness of mitotic spindle assembly to microtubule dynamics plasticity revealed by end-binding proteins and tubulin tagging

Robert, M. L. V.; Perrier, A.; Chenevert, J.; El-Mossadeq, L.; Maton, G.; McDougall, A.; Castro, A.; Lorca, T.; Canman, J. C.; Castagnetti, S.; Dumont, J.; Lacroix, B.

2026-07-30 cell biology 10.64898/2026.07.29.741283 medRxiv
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Microtubules are dynamic, conserved cytoskeletal filaments that are essential for all eukaryotic cells. Microtubule dynamic properties are primarily characterized by measuring how fast they grow and shrink (growth and shrinkage rates) and how often they switch between assembly and disassembly (catastrophe and rescue frequencies). These four parameters measured for individual filaments can inform on the behavior of the entire microtubule network at the cell level. By comparing microtubule dynamics in Caenorhabditis elegans one-cell embryos using different genetically-encoded fluorescent probes, we observed an unexpected high variability in these parameters. Microtubule dynamics parameters were consistently higher in C. elegans strains expressing a fluorescently labelled microtubule end-binding protein than in strains relying on tubulin labelling, with microtubule growth rates differing by nearly a factor of two between the two conditions. This discrepancy was not limited to C. elegans, as we observed a similar effect in embryos of the tunicate Phallusia mammillata. Despite this, spindle size and assembly timing were only mildly affected. However, embryos expressing labelled end-binding protein exhibited higher frequency of mitotic defects and perturbed embryonic development upon exposure to various stresses such as elevated temperature or a compromised spindle assembly checkpoint. Thus, our work reveals both the remarkable robustness of mitotic spindle assembly in response to extreme microtubule dynamics plasticity, and the requirement for strict control of microtubule dynamics across successive early embryonic divisions. Our findings should also serve as a cautionary note when using tagged end-binding proteins to measure microtubule dynamics.

6
Transfected plasmids have reduced expression in cells deficient in SEPTIN 9 or ESCRT proteins

Ngwoke, E.; Hollien, J.

2026-08-24 cell biology 10.64898/2026.08.21.746337 medRxiv
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Transfection of cells with DNA plasmids typically involves the uptake of lipoparticles by endocytosis, followed by the inefficient escape of these particles from endosomes into the cytoplasm. We found that the expression of transfected plasmids was reduced in cells depleted of either SEPTIN 9 or proteins in the endosomal sorting complexes required for transport (ESCRT) pathway. The reduction in plasmid expression could not be fully explained by effects on endocytosis. SEPTIN 9 depletion appeared to reduce the acidification of plasmid-containing compartments, suggesting that it primarily affects the pH-sensitive escape of plasmids from endosomes. Depletion of the ESCRT proteins VPS36 or ALIX resulted in especially dramatic reductions in transfected plasmid expression, which were accompanied by reduced colocalization between the transfected DNA and CHMP4, an ESCRT protein important for endosomal membrane remodeling during intraluminal vesicle formation. Finally, transfected plasmid DNA was strongly colocalized with LC3B, suggesting that the default pathway for transfected material is autophagy.

7
ER shaping proteins guide spindle elongation and division during rapid cleavage mitoses

Rollins, K. R.; Clark, A. R.; Kandel, P.; van Engelenburg, S. B.; Blankenship, J. T.

2026-07-16 cell biology 10.64898/2026.07.15.738729 medRxiv
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The ER is a complex network of membranes that inhabits much of the cytoplasm of cells - however, this network undergoes a massive condensation and rapid remodeling during cell division. In Drosophila cleavage divisions, this results in a tight association of the ER with centrosomes and mitotic spindle poles. Previous work has shown that this relationship between the ER and centrosomes must be finely tuned to enable successful spindle elongation, and that overaccumulation of the ER in these stages can result in failed centrosome maturation. During interphase, the ER exists in tubular and sheet-like arrangements, with a variety of "shaping" proteins enforcing these topologies. Here, we examine the contributions of these ER shaping proteins to the rapid changes that occur during cleavage mitoses in the Drosophila embryo. A screen of ER shaping proteins revealed that disruption of Reep-family proteins leads to mitotic failures at characteristic cleavage stages. Compromising ReepA, the Drosophila ortholog of the Reep1-4 subfamily, had a lesser impact on early embryonic mitoses. However, ReepB (the ortholog of the Reep5-6 subfamily) disruption, significantly affects ER mitotic coat morphologies, resulting in a frilled ER phenotype and a reduction of ER adherence to the spindle space accompanied by division failures. Overexpressing ReepA does not rescue ReepB mitotic or ER morphology defects and instead introduces local condensates of abnormal ER structures. These data suggest that dedicated Reep proteins guide ER mitotic properties at specific early developmental stages. Using a cell-based in vitro analysis of Drosophila Reeps, we identify differential "tubulating" properties of ReepA and ReepB. Together these data suggest that the minutes-scale ER remodeling required for early mitoses is governed by shaping proteins, and that ReepB family members are especially important in some of the most rapid cleavage divisions that occur in early embryo.

8
Ionic Exposure History Shapes Inner Nuclear Membrane Voltage and Chromatin Texture Responses

Sediqi, H.; Mathews, J.; de Nola, G.; Lytton-Jean, A. K. R.; Levin, M.

2026-07-08 cell biology 10.64898/2026.06.23.733978 medRxiv
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While bioelectricity is increasingly recognized as an important regulator of cell function and morphogenesis, the field has almost exclusively focused on plasma membrane states. Voltage across the inner nuclear membrane (INM) has been proposed as a potential regulator of nuclear function, but how it responds to extracellular ionic perturbations and whether it relates to chromatin organization remain unclear. Here, we targeted the ratiometric genetically encoded voltage indicator ASAP3-R3 to SUN2-associated nuclear membranes in intact NRK cells and combined INM voltage measurements with Gray-Level Co-Occurrence Matrix (GLCM)-based chromatin texture analysis. Reporter localization was confirmed by fluorescence imaging and electron microscopy, and functional validation in isolated nuclei showed that sodium-potassium pump inhibition produced INM depolarization consistent with Goldman-Hodgkin-Katz (GHK)-based prediction. We then used our validated construct to determine the response of Vnuc and chromatin texture to changing ionic conditions via two exposure methods, gradual (ramped) exposure or direct application. In intact cells, ramping different sets of ionic solutions of decreasing sodium/increasing potassium, decreasing sodium, increasing potassium, or decreasing chloride induced INM hyperpolarization and coordinated changes in chromatin texture, including increased contrast and entropy, reduced homogeneity, and reduced nuclear area. These effects were strongly path-dependent, with nuclear responses shaped by the history and order of ionic exposure: sodium and potassium responses emerged most clearly during ramping exposure, whereas reducing chloride by direct exposure showed a more pronounced response profile. Direct changes in sodium exposure produced limited electrical and chromatin-texture effects, while direct potassium exposure altered chromatin texture and nuclear area without significantly changing VNuc. Importantly, shifting baseline chromatin state in either direction, through Trichostatin-A (TSA)-induced chromatin relaxation or sodium azide/2-deoxy-D-glucose-induced compaction, blunted ion-associated Vnuc and chromatin responses across sodium, potassium, and chloride conditions. Together, these findings identify the nucleus as a dynamic, ion-responsive electro-structural system in which INM voltage and chromatin organization are functionally coupled, and in which both ionic trajectory and pre-existing chromatin state shape the magnitude of the nuclear response.

9
Tagging C. elegans septins disrupts cytoskeletal scaffolding but not post-embryonic roles

Rivenbark, L. A.; Singhal, V.; Perry, J. A.; Maddox, A. S.

2026-06-10 cell biology 10.64898/2026.06.09.731194 medRxiv
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Septins are conserved polymer-forming proteins that scaffold the actomyosin cytoskeleton, its regulators, and other factors to cellular membranes. Septins also sense micron-scale curvature, bind microtubules, and establish membrane diffusion barriers. C. elegans is a powerful animal model to study septins roles because there are only two septin genes: unc-59 and unc-61. In many fungal and animal cell types, septins are required for proper cytokinesis. In the C. elegans zygote, septins scaffolding roles in cytokinesis manifest during the chiral rotation of the cell cortex and the asymmetry of cytokinetic ring closure. Originally named for the uncoordinated movement exhibited by hypomorphic alleles, UNC-59 and UNC-61 are also required for normal postembryonic development, germline development, and fertility. To study C. elegans septins in these various contexts, we sought a fluorescent-protein tagging strategy that minimally perturbed septin function. We examined strains in which GFP, mKate2 or wrmScarlet had been inserted at the unc-59 locus, or coupled to unc-61b/c at an exogenous locus, to encode fluorescently tagged fusion proteins. We compared these tagged septins to classical hypomorphic alleles, and to new null alleles. Null alleles phenocopied hypomorphic alleles in all our assays. Strains bearing fluorescently tagged septins exhibited defects in zygote cytokinesis, qualitatively phenocopying both hypomorphic and null alleles. These findings agreed with recent work with fission yeast, demonstrating the sensitivity of septin function to tagging. Interestingly, tagging septins did not perturb postembryonic development including animal mobility. This suggests that septins play distinct functions in the zygote versus later in development.

10
SERCA is a host target of the SARS-CoV-2 envelope protein linking calcium homeostasis to autophagy

Berta, B.; Toth, S.; Lorincz, P.; Darjania, Z.; Kato, N. A. T.; Benachour, A.; Benachour, N.; Hegedus, T.; Padanyi, R.

2026-08-19 cell biology 10.64898/2026.08.14.744854 medRxiv
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The SARS-CoV-2 envelope (E) protein is a virulence factor that remodels host endomembranes, but mechanisms remain incompletely understood. We recently demonstrated that E protein interacts with and inhibits the sarco/endoplasmic reticulum Ca2-ATPase (SERCA), disrupting ER calcium homeostasis. Here, we investigated how this perturbation affects autophagy-associated membrane organization. E protein expression induced lipidated LC3 accumulation and enlarged p62-positive structures, consistent with dysregulated autophagic turnover. Although E protein partially colocalized with LC3 and p62, enlarged p62-positive structures were also observed in cells retaining the reticular ER distribution of E protein, indicating that their formation does not require association with E protein or ER reorganization. E protein also increased the association of p62-positive structures with lysosomes without altering lysosome abundance. Pharmacological SERCA activation attenuated E protein-induced remodeling of autophagy-associated structures, demonstrating that SERCA inhibition contributes to these alterations. Together, our findings establish SERCA-dependent ER calcium homeostasis as a host pathway linking E protein expression to remodeling of autophagy-associated membrane compartments, providing a mechanistic framework for how the SARS-CoV-2 E protein promotes ER membrane remodeling associated with coronavirus replication.

11
Nuclear wrinkles result from geometric adaptations to cellular and nuclear morphological changes in epithelial cells

Le, K. M.; Kono, Y.; Shimi, T.; Kimura, H.

2026-08-27 cell biology 10.64898/2026.08.26.747252 medRxiv
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Mechanical cues influence cell behavior and fate and are frequently accompanied by changes in nuclear shape; however, how epithelial nuclei accommodate such deformations remains incompletely understood. Here, we investigated the formation and regulation of nuclear wrinkles (NWs), inward folds of the nuclear envelope, in human epithelial cells. Using quantitative confocal imaging in 2.5D spheroid cultures and controlled 2D monolayers, we found that NWs formed frequently in MCF10A cells but rarely in hTERT-RPE1 cells, indicating pronounced cell-type specificity. NW frequency increased with cell density and was tightly associated with coordinated geometric changes consistent with nuclear rounding. Disruption of F-actin organization, but not microtubules, robustly induced NW formation, and acute cell rounding triggered by trypsinization was sufficient to induce widespread wrinkling across multiple cell types. Live-cell imaging revealed that NWs are dynamic and reversible at low cell density but become stabilized under sustained confinement. NW formation occurred without detectable nuclear envelope rupture, DNA damage, or stress-associated histone phosphorylation. Quantitative analysis supports a passive geometric model in which redistribution of excess nuclear surface area accommodates nuclear shape remodeling, allowing epithelial nuclei to buffer mechanical constraints while preserving nuclear integrity.

12
Artificial endoplasmic reticulum-lipid droplet tethers facilitate lipid incorporation into lipid droplets

Williams, V.;Miner, G.;Cohen, S.

2026-06-26 Cell Biology 10.64898/2026.06.25.734520 medRxiv
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Lipid droplets (LDs) are ubiquitous organelles that store neutral lipids to meet cellular energetic and signaling needs. As a unique monolayer structure, LDs arise from the endoplasmic reticulum (ER) and acquire proteins and lipids through their membrane contact sites (MCSs) with the ER. In this study, we exogenously induce ER-LD MCSs using a dimerization-dependent fluorescent protein (ddFP) system. Strikingly, inducing these MCSs increases LD size without influencing LD total amount per cell, in a manner that is distinct from LD biogenesis induced by the dietary fatty acid oleic acid. By examining the trafficking of the triacylglycerol synthesis enzyme DGAT2 under ddFP induction, we found that artificial tethering recruits LD proteins to the ER-LD interface but not to the LD surface, unlike oleic acid supplementation. However, by supplementing ddFP-transfected cells with fluorescent fatty acids, we found that ddFP-positive LDs preferentially incorporate exogenous lipid, suggesting that inducing MCSs can facilitate ER-to-LD lipid transfer. These results demonstrate ddFPs as a tool for manipulating LD MCSs and elucidate the role of ER-LD MCSs following LD biogenesis to continue to promote LD growth.

13
Arp2/3-mediated turnover of large clathrin lattices is regulated through the tyrosine kinase ACK

Hazelbaker, M.;Michalak, D.;Butler, M.;Beach, J.;Taraska, J.;Bear, J.

2026-06-15 Cell Biology 10.64898/2026.06.12.731920 medRxiv
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Clathrin mediated endocytosis (CME) is a vital cellular process that mediates cell signaling by controlling the internalization of extracellular cargo and activated receptors. Arp2/3-branched actin provides force to assist in membrane invagination and scission in CME. Loss of Arp2/3-branched actin in conditional Arpc2 KO fibroblasts results in an increase of large arrested clathrin lattices (LACLs) visualized by live-cell TIRF imaging. Additional structural details of LACLs were revealed using electron microscopy and include an increase in arrested clathrin lattices of various curvatures. Numerous CME proteins have heightened levels of tyrosine phosphorylation at these LACLs in Arpc2 KO cells. We identified the non-receptor tyrosine kinase ACK (Activated Cdc42-Associated Kinase) as a key upstream regulator of LACL turnover. CRISPR KO of ACK abrogates LACL tyrosine phosphorylation and impairs cells capacity to resolve LACLs. Our results support a model where ACK recruitment and activation at LACLs drives branched actin formation to help resolve large accumulations of arrested CME structures.

14
N-cadherin orientational order decreases with mechanical load at cardiomyocyte adherens junctions

Tran, Y. T. B.; Dean, W. F.; Han, Y.; Karpov, K. I.; Ainslie, C. M.; Mattheyses, A. L.; Kwiatkowski, A.

2026-07-20 cell biology 10.64898/2026.07.17.739172 medRxiv
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Adherens junctions physically connect neighboring cells and are built around classical cadherins, homophilic transmembrane proteins that link to the actin cytoskeleton. Classical cadherins can organize into ordered arrays in vitro, but whether they do so in cells remains to be established. Here, we use fluorescence polarization microscopy to show that the classical cadherin N-cadherin is orientationally ordered at cardiomyocyte cell-cell junctions. Whereas the desmosomal cadherin desmoglein 2 was similarly ordered across junction types, N-cadherin order was spatially heterogeneous. Order was lowest where organized myofibrils terminate at high-load, vinculin-enriched axial junctions and highest at low-load, vinculin-poor lateral junctions. This inverse relationship between order and mechanical load suggests that robust cadherin-mediated adhesion does not require ectodomain order. Our findings provide evidence that a classical cadherin is orientationally ordered in cells and show that mechanically active adhesions adopt distinct organizational strategies according to local mechanical demands. Summary StatementAt cardiomyocyte junctions, N-cadherin is ordered where mechanical load is low but disordered where load is high, suggesting that cadherin organization adapts to local force conditions.

15
A systems-level proteomic analysis identifies kinesin targets of KIFBP during neuronal development

Paschall, S.-C.; Blasius, T. L.; Missman, A.; Rodriguez, P.; Cianfrocco, M. A.; Verhey, K. J.; Stumpff, J.

2026-07-20 cell biology 10.64898/2026.07.17.739260 medRxiv
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Kinesins are molecular motor proteins essential for organizing and remodeling the cytoskeleton during neuronal development and maintenance. One key regulator is kinesin family binding protein (KIFBP), which inhibits a subset of kinesins by blocking motor-microtubule interactions. Homozygous mutations in KIFBP cause Goldberg-Shprintzen Syndrome (GOSHS), a neurodevelopmental disorder characterized by intellectual disability, microcephaly, and axonal neuropathy. Although loss of KIFBP has been linked to reduced neurite length and microtubule disorganization, the specific kinesins underlying these phenotypes remain unclear. Here we use a CRISPR-Cas9 generated KIFBP knockout Neuro-2a cell line to demonstrate that KIFBP is required for neurite extension and use inducible GFP-KIFBP to define the KIFBP interactome during neuronal differentiation. Immunoprecipitation coupled with mass spectrometry identified both known and novel KIFBP-associated kinesins. Single molecule TIRF microscopy confirmed direct inhibition of a subset of kinesins that co-immunoprecipitated with KIFBP. Notably, we identified KIF5A and KIF18B as previously unrecognized regulatory targets with potential roles in neuronal development. Together, these findings establish Neuro-2a cells as a model for studying KIFBP function and provide new insight into the regulation of kinesin activity and cytoskeletal dynamics in neurons.

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Klp61f and ncd function as an accelerator and brake to regulate myonuclear spacing

Folker, E.; Padilla, J. R.; Qiu, Y.; Kimmel, G.; Vallely, M.; Olivieri, L.

2026-07-27 cell biology 10.64898/2026.07.24.740572 medRxiv
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One of the first genes identified to regulate the spacing of nuclei in the multinucleated myofiber was Kinesin-1. However, the mechanism by which Kinesin-1 or other kinesins regulate myonuclear spacing is not known. Critically, the myofiber lacks centrosomes, and the many myonuclei act as the primary microtubule organizing centers of the cell. Because of this unique re-structuring, we hypothesized that the kinesins that drive centrosomes apart during mitotic spindle elongation may play a similar role in spacing myonuclei. We found that the bipolar Kinesin-5 (Klp61f) and the (-)-end directed Kinesin-14 (ncd) were both necessary for myonuclear spacing at different times, with both being necessary during embryogenesis, but only ncd being necessary in the fully differentiated myofiber. To investigate the shared mechanisms during embryogenesis, we used live-imaging and found that, similar to the mitotic spindle, Klp61f acts as an accelerator for myonuclear movement, whereas ncd acts as a brake contrary to this movement. To investigate these mechanisms and test the hypothesis that this is dependent on microtubule-sliding, we used super-resolution microscopy to visualize and quantify the microtubule network in animals with disrupted Klp61f or ncd. We found that in both cases, there was a decrease in the amount of microtubule overlap between neighboring myonuclei. Furthermore, we found that disrupting ncd led to severe changes in microtubule network organization, supporting our hypotheses that microtubule-sliding is necessary to space myonuclei, and that ncd likely functions through a unique mechanism in the differentiated myofiber to maintain myonuclear spacing. Together, our data supports a model where myonuclear spacing is regulated by a counteracting force generated by different kinesins during embryonic development. Furthermore, one kinesin, ncd, is repurposed in the differentiated myofiber to dynamically crosslink microtubules, a function necessary to anchor nuclei in place. Thus, kinesin motors regulate myonuclear spacing across developmental time by leveraging opposing forces through diverse mechanisms.

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The p97 adaptor p47/NSFL1C is necessary for stress granule dissolution after heat stress

Raman, M.; Johnson, M. A.; Khanna, R.; Mukkavalli, S.; Nguyen, L.

2026-06-10 cell biology 10.64898/2026.06.08.730917 medRxiv
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Stress granules form in response to diverse cellular perturbations to sequester translation components until the stress is resolved. Stress granules are composed of RNA-protein assemblies in membrane delimited structures and must be rapidly disassembled to release components to allow translation to resume. Disassembly of stress granules formed in response to heat stress is dependent on ubiquitiylation of stress granule components such as G3BP1. Ubiquitylation of stress granule proteins recruits the AAA-ATPase p97 (also known as VCP) to enable ubiquitin-dependent disassembly of these structures. Loss of p97 activity leads to the persistence of stress granules and is implicated in several age-related neurodegenerative diseases. Here we show that p97 recruitment to stress granules is dependent on its ubiquitin binding co-factor p47. p47 translocates to stress granules in response to a variety of cellular stressors and is required for the recruitment of p97 to stress granules. Loss of p47 leads to an inhibition in stress granule disassembly. We further show that p47 associates with G3BP1 in response to heat stress in a ubiquitin-dependent manner. Taken together our data adds to the growing list of p97 adaptors that are implicated in the recruitment of p97 for dissolution of stress granules.

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Lamin B1 affects nuclear shape and integrity through chromatin stiffness and not lamin stiffness

Li, A.; Chu, C. G.; Lang, N.; Banigan, E. J.; Stephens, A. D.

2026-08-11 cell biology 10.64898/2026.08.10.744010 medRxiv
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The mechanical properties of the nucleus are critical for maintaining nuclear integrity and function. We previously showed that chromatin dominates short-extension mechanics whereas lamins provide long-extension strain stiffening. To distinguish the roles of lamin isoforms, micromanipulation nucleus force measurements were performed on isolated nuclei from lamin A/C (Lmna-/-) and lamin B1 (Lmnb1-/-) knockout mouse embryonic fibroblast cells. Lamin A/C knockout does not alter short-extension nuclear stiffness but is essential for strain stiffening at longer extensions. Oppositely, lamin B1 loss reduced short-extension stiffness due to facultative heterochromatin loss while long-extension strain stiffening was slightly increased. Loss of lamin A/C and B1 resulted in similar lamin-chromatin linkers effects as LBR did not change and LAP2{beta} decreased in both. A simulation model of a polymeric lamin shell with stiff lamin A/C and softer lamin B1 subunits can qualitatively recapitulate experimental measurements of lamin knockout cells. Lamin A/C knockout resulted in abnormal nuclear shape but not nuclear blebbing or rupture whereas lamin B1 knockout, similar to other perturbations that cause heterochromatin loss, resulted in increased nuclear blebbing and rupture. This work illuminates the distinct mechanical roles of lamin A/C and B1 in determining nuclear structure and integrity.

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KIFC1 overexpression induces monopolar spindles by preventing centrosome separation during rapid cleavage divisions

Yamamoto, T.; Kiyomitsu, A.; Ming, Y.; Kiyomitsu, T.

2026-08-20 cell biology 10.64898/2026.08.14.744973 medRxiv
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Bipolar spindle assembly is essential for accurate chromosome segregation. KIFC1, a conserved Ran- regulated minus-end-directed kinesin-14 motor, accumulates in the nucleus during interphase and promotes chromatin-mediated spindle assembly during mitosis and meiosis. In human oocytes, reduced KIFC1 levels destabilize meiotic spindles, a defect that can be rescued by increasing KIFC1 expression. However, how KIFC1 expression levels affect mitotic spindle stability during cleavage divisions in vertebrates remains unclear. Here, we show that whereas an approximately 50% reduction in KIFC1 causes no detectable defects in spindle assembly, approximately 10-fold overexpression of KIFC1 induces monopolar spindle formation, leading to chromosome mis-segregation and embryonic lethality in medaka early embryos. KIFC1 overexpression results in ectopic centrosomal localization during interphase, impairing the separation of duplicated centrosomes before mitotic entry. Analyses of KIFC1 mutants demonstrated that these centrosome separation defects require KIFC1s microtubule-binding and motor activities and are further enhanced by deletion of KIFC1s nuclear localization sequences. Together, our findings demonstrate that tight regulation of KIFC1 expression and its nuclear sequestration is essential for the proper separation and positioning of duplicated centrosomes before mitotic entry, thereby ensuring efficient bipolar spindle assembly during the rapid cleavage divisions of vertebrate embryos. HighlightsO_LIKIFC1 accumulates in the nucleus and at the embryonic spindle midplane via the Ran pathway. C_LIO_LIPartial KIFC1 depletion does not impair spindle assembly in medaka early embryos. C_LIO_LIKIFC1 overexpression induces monopolar spindles by preventing centrosome separation. C_LIO_LICentrosome separation defects require KIFC1 microtubule-binding and motor activity. C_LI

20
An in vivo examination of Dynein-Cargo complex formation.

Allen, P.; Neiswender, H.; Lu, W.; Lakonishok, M.; Veeranan-Karmegam, R.; Pride, J.; Gelfand, V. I.; Gonsalvez, G. B.

2026-08-04 cell biology 10.64898/2026.08.02.742322 medRxiv
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Long-range intracellular transport relies on microtubule motors. This process is particularly important in large cells such as neurons and oocytes. While transport towards the plus-end of microtubules utilizes many kinesins, minus-end transport is largely mediated by a single motor, cytoplasmic dynein. Activation of dynein requires the large dynactin complex as well as a cargo adaptor. How dynein, dynactin, and adaptors assemble in vivo, particularly within specialized tissues such as the Drosophila egg chamber remains unclear. In the current study, we defined the dynein interactome in Drosophila egg chambers using in vivo proximity biotin ligation. Our findings suggest that Bicaudal-D (BicD) is the principal adaptor responsible for activating dynein and linking it with cargo in this tissue. We also identified Centrocortin (Cen) as a dynein adaptor in egg chambers. However, unlike BicD, loss of Cen did not affect dynein localization or apparent activation. To more specifically analyze adaptor-dependent assembly and cargo transport, we examined dynein light intermediate chain (Dlic) mutants known to impair adaptor binding. As expected, these mutants disrupted the BicD-dynein interaction. However, Cen remained associated with the dynein/dynactin complex in the mutant background, suggesting that Cen engages the motor by a different mechanism. Finally, live imaging of microtubules revealed that even when adaptor binding is compromised, dynein-driven microtubule gliding can still deliver nurse cell-derived cargo into the oocyte, albeit with reduced efficiency. Collectively, our results reveal multiple, mechanistically distinct routes for adaptor association with dynein in vivo and indicate that redundant processes can sustain cargo transport during oogenesis.